Origins of Multicellularity RNA Sequencing - SRA

SRX096920: Origins of Multicellularity RNA Sequencing
1 ILLUMINA (Illumina HiSeq 2000) run: 5,690 spots, 1.2M bases, 800,712b downloads

UUID: 85e0e930-34d9-469e-8cb9-04910d43399a

Design: RNA was converted into cDNA libraries and sequenced on Illumina

Submitted by: Broad Institute (BI)

Study: WGS sequencing

PRJNA20563 • SRP022576 • All experiments • All runs

show Abstracthide Abstract

The <a href="http://www.broad.mit.edu/annotation/fungi/fgi/">Broad Institute</a> is sequencing the <i>Allomyces macrogynus</i> strain ATCC 38327 genome at 11.39X coverage using whole genome shotgun (WGS) sequencing.

Sample: Allomyces macrogynus ATCC_38327 RNA sample 98168.0

SAMN00716792 • SRS260858 • All experiments • All runs

Organism: Allomyces macrogynus ATCC 38327

Library:

Name: Solexa-63527

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Spot descriptor:

1 forward barcode

Group tag	Basecalls
	AGCAATTC

110 reverse

Experiment attributes: (show all 5 attributes...) (hide...)

gssr_id: 101182.0

lsid: BROAD:SEQUENCING_SAMPLE:101182.0

material_type: RNA

project: G13377

work_request: 25505

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2011-07-27 14:34:40.0	GAPipeline	RTA1.10.36	Sequencer Application 1.3.8

Runs: 1 run, 5,690 spots, 1.2M bases, 800,712b

Run	# of Spots	# of Bases	Size	Published
SRR343046	5,690	1.2M	800,712b	2011-09-13

ID:: 110922

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity